SubtiBank SubtiBank
yjqA [2018-10-10 17:17:42]
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yjqA [2018-10-10 17:17:42]

unknown
locus
BSU12470
pI
5.28
mw
13.68 kDa
protein length
125 aa Sequence Blast
gene length
375 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.1|PBSX prophage]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,318,528 → 1,318,905

    The protein

    Structure

  • [PDB|3HSA] (from Shewanella amazonensis, 44% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|EBCDD00317852DEE0C5070AEA16A3A07093D7661|yjqA]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B304 (yjqA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1303 NBRP B. subtilis, Japan]
  • BKE12470 (Δ[gene|EBCDD00317852DEE0C5070AEA16A3A07093D7661|yjqA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATATACCTCCTCTGCG, downstream forward: _UP4_TAAGGCGAAAAGACGGAAGC
  • BKK12470 (Δ[gene|EBCDD00317852DEE0C5070AEA16A3A07093D7661|yjqA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATATACCTCCTCTGCG, downstream forward: _UP4_TAAGGCGAAAAGACGGAAGC